Session 1: 10:30 a.m.-Noon
1A Biology Applications
Parallel Hierarchical Molecular Structure Estimation Cheng Che Chen and Russ B. Altman, Stanford University; Jaswinder Pal Singh, Princeton University A Data-Parallel Implementation of O(N) Hierarchical N-body Methods Yu Hu, Harvard University; S. Lennart Johnsson, University of Houston and Harvard University The Design of a Portable Scientific Tool: A Case Study Using SnB Steven M. Gallo and Russ Miller, State University of New York at Buffalo; Charles M. Weeks, Hauptman Woodward Medical Research Institute1B Performance I
RUNTIME Performance of Parallel Array assignment: An Empirical Study Siddhartha Chatterjee and Lei Wang, The University of North Carolina at Chapel Hill James M. Stichnoth, Carnegie Mellon University ScaLAPACK: A Portable Linear Algebra Library for Distributed Memory Computers - Design Issues and Performance Jack Dongarra, Laura Blackford, A. Cleary, S. Hammarling, University of Tennessee, Knoxville; Jaeyoung Choi, Soongsil University, Seoul, Korea; J. Demmel, I. Dillon, University of California, Berkeley; G. Henry, Intel SSPD Network Performance Modeling for PVM Clusters Mark J. Clement, Phyllis E. Crandall, Michael R. SteedSession 2: 1:30 p.m.-3:00 p.m.
2A Visualization & Education
Scalable Algorithms for Interactive Visualization of Curved Surfaces Dinesh Manocha, Subodh Kumar and Chun-Fa Chang, University of North Carolina STREN: A Highly Scalable Parallel Stereo Terrain Renderer for Planetary Mission Simulations Ansel Teng and Meemong Lee, Jet Propulsion Lab Scott Whitman, Cray Research Inc. Education in High Performance Computing via the WWW: Designing and Using Technical Materials Effectively Susan Mehringer, Cornell Theory Center2B Compiler Analysis
Compiler-directed Shared-Memory Communication for Iterative Parallel Applications Guhan Viswanathan and James R. Larus, University of Wisconsin-Madison Dynamic Data Distribution with Control Flow Analysis Jordi Garcia, Eduard Ayguade and Jesus Labarta, Universitat Politecnica de Catalunya Transformations for Imperfectly Nested Loops Induprakas Kodukula and Keshav Pingali, Cornell UniversitySession 3: 3:30 p.m.-5:00 p.m.
3A Geophysical Applications
Earthquake Ground Motion Modeling on Parallel Computers Omar Ghattas, Hesheng Bao, Jacobo Bielak, Loukas F. Kallivokas, David R. O'Hallaron, Jonathan R. Shewchuk and Jifeng Xu, Carnegie Mellon University Performance Analysis and Optimization on the UCLA Parallel Atmospheric General Circulation Model Code John Lou, California Institute of Technology; John Farrara, University of California Climate Data Assimilation on a Massively Parallel Supercomputer Hong Q. Ding and Robert D. Ferraro, Jet Propulsion Laboratory3B Tools
Performance Analysis Using the MIPS R10000 Performance Counters Marco Zagha, Silicon Graphics, Inc. Profiling A Parallel Language Based on Fine-Grained Communication Kaus E. Schauser, Bjoern Haake and Chris Scheiman, University of California at Santa Barbara Modeling, Evaluation and Testing of Paradyn Instrumentation System Abdul Waheed, Michigan State University
Session 4: 10:00 a.m.-Noon
4A Performance II
An Analytical Model of the HINT Performance Metric Quinn O. Snell and John L. Gustafson, Ames Laboratory Communication Patterns and Models in Prism: A Spectral Element-Fourier Parallel Navier-Stokes Solver George Em Karniadakis and Constantinos Evangelinos, Brown University The C3I Parallel Benchmark Suite - Introduction and Preliminary Results Rakesh Jha, Brian VanVoorst, Luiz S. Pires, Wing Au, Minesh Amin, Honeywell Technology Center; Richard C. Metzger, USAF Rome Laboratory; David A. Castanon, ALPHATECH, Inc.; Vipin Kumar, University of Minnesota The Performance of the NEX SX-4 on the NCAR Benchmark Suite Steven W. Hammond, Richard D. Loft, NCAR; Philip D. Tannenbaum, HNSX Supercomputers, Inc.
4B Networking & Architecture
Minimal Adaptive Routing with Limited Injection on Toroidal k-ary n-cubes Fabrizio Petrini and Marco Vanneschi, Universita di Pisa Low-Latency Communication on the IBM RISC System/6000 SP Chi-Chao Chang, Grzegorz Czajkowski, Chris Hawblitzell and Thorsten von Eicken, Cornell University CompileD Communication for All-optical TDM Networks Xin Yuan, Rami. Melhem and Rajiv. Gupta,The Univ. of Pgh. Increasing the Effective Bandwidth of Complex Memory Systems IN Multivector Processors Anna M. del Corral and Jose M. Llaberia, Universitat Politecnica de Catalunya
Session 5: 1:30 p.m.-3:00 p.m.
5A Hydrodynamics Applications
A Parallel Cosmological Hydrodynamics Code Paul W. Bode, Univ. of Pennsylvania; Guohong Xu, University of California at Santa Cruz; Renyue Cen, Princeton University Transient Dynamics Simulations: Parallel Algorithms for Contact Detection and Smoothed Particle Hydrodynamics Bruce Hendrickson, Steve Plimpton, Steve Attaway, Jeff Swegle, Courtenay Vaughan, Dave Gardner, Sandia National Labs Performance of a Computational Fluid Dynamics Code on NEC and CRAY Supercomputers: Beyond 10 Gigaflops Ferhat F. Hatay, University of Colorado at Boulder
5B Algorithms
Parallel Preconditioners for Elliptic PDEs Vivek Sarin and Ahmed Sameh, University of Minnesota Sparse LU Factorization with Partial Pivoting on Distributed Memory Machines Cong Fu and Tao Yang, Univ. of California at Santa Barbara Implementation of Strassen's Algorithm for Matrix Multiplication Elaine M. Jacobson, Anna Tsao and Thomas Turnbull, Center for Computing Sciences; Steven Huss-Lederman, University of Wisconsin-Madison; Jeremy R. Johnson, Drexel University
Session 6: 3:30 p.m.-5:00 p.m.
6A Algorithms II
Global Load Balancing with Parallel Mesh Adaption on Distributed - Memory Systems Rupak Biswas, NASA Ames Research Center; Leonid Oliker, Research Institute for Advanced Computer Science; Andrew Sohn, Dept. of Computer & Information Science Parallel Hierarchical Solvers and Preconditioners for Boundary Element Methods Ananth Grama, Vipin Kumar, and Ahmed Sameh, University of Minnesota Parallel Multilevel k-way Partitioning Scheme for Irregular Graphs George Karypis and Vipin Kumar, University of Minnesota
B Parallel Programming Support
Double Standards: Bringing Task Parallelism to HPF Via the Message Passing Interface Ian Foster and David R. Kohr, Jr., Argonne National Laboratory; Rakesh Krishnaiyer and Alok Choudary, Syracuse University OMPI: Optimizing MPI Programs Using Partial Evaluation Hirotaka Ogawa and Satoshi Matsuoka, The University of Tokyo Particle-in-Cell Simulation Codes in High Performance Fortran Erol Akarsu, Kivanc Dincer, Geoffrey C. Fox and Tomasz Haupt, Northeast Parallel Architectures Center
Session 7: 10:00 a.m.-Noon
7A Scheduling
Application-Level Scheduling on Distributed Heterogeneous Networks Francine D. Berman, Rich Wolski, Silvia Figueira, Jennifer Schopf and Gary Shao, University of California at San Diego NetSolve: A Network Server for Solving Computational Science Problems Henri Casanova, University of Tennessee, Knoxville; Jack Dongarra, University of Tennessee, Knoxville and Oak Ridge National Laboratory Multimethod Communiction for High Performance Metacomputing Ian Foster, Jonathan Geisler, Steven Tuecke, Argonne National Laboratory; Karl Kesselman, California Institute of Technology Building A World-Wide Virtual Machine Based on Web and HPCC Technologies Kivanc Dincer and Geoffrey C. Fox, Northeast Parallel Architectures Center
7B Data Mining & Modeling
Parallel Data Mining for Association Rules on Shared-memory Multi-processors M.J. Zaki, M. Ogihara, S. Parthasarathy and W. Li, University of Rochester Dynamic Computation Migration in DSM Systems Wilson C. Hsieh, University of Washington; M. Frans Kaashoek, MIT Laboratory for Computer Science; William E. Weihl, DEC Systems Research Center Performance Modeling for the Panda Array I/O Library Ying Chen, Marianne Winslett, Szu-wen Kuo, Yong Cho, University of Illinois; Mahesh Subramaniam, Oracle Corportion; Kent Seamons, Transarc Corporation Striping in Disk Array rm2 Enabling the Tolerance of Double Disk Failures Chan-Ir, POSTECH
Session 8: 3:30 p.m.-5:00 p.m.
8A Particle Dynamics
Lightweight Computational Steering of Very Large Scale Molecular Dynamics Simulations David M. Beazley, University of Utah; Peter S. Lomdahl, Los Alamos National Laboratory Design of a Large Scale Discrete Element Soil Model for High Performance Computing Systems Alex R. Carrillo, David A. Horner, John F. Peters, John E. West, U.S. Army Engineer Waterways Experiment Station Molecular Simulation of RheologicaProperties Using Massively Parallel Supercomputers P. T. Cummings, R. K. Bhupathiraju, S.T. Cui and S. Gupta, University of Tennessee; H. D. Cochran, Oak Ridge National Laboratory
8B Data & Scheduling
Virtual Memory Versus File Interfaces for Large, Memory-Intensive Scientific Applications Yoonho Park and Ridgway Scott, University of Houston; Stuart Sechrest, University of Michigan Impact of Job Mix on Optimizations for Space Sharing Schedulers Jaspal Subhlok, Thomas Gross and Takashi Suzuoka, Carnegie Mellon University
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